Package: factReg 1.0.0
factReg: Multi-Environment Genomic Prediction with Penalized Factorial Regression
Multi-environment genomic prediction for training and test environments using penalized factorial regression. Predictions are made using genotype-specific environmental sensitivities as in Millet et al. (2019) <doi:10.1038/s41588-019-0414-y>.
Authors:
factReg_1.0.0.tar.gz
factReg_1.0.0.zip(r-4.5)factReg_1.0.0.zip(r-4.4)factReg_1.0.0.zip(r-4.3)
factReg_1.0.0.tgz(r-4.4-any)factReg_1.0.0.tgz(r-4.3-any)
factReg_1.0.0.tar.gz(r-4.5-noble)factReg_1.0.0.tar.gz(r-4.4-noble)
factReg_1.0.0.tgz(r-4.4-emscripten)factReg_1.0.0.tgz(r-4.3-emscripten)
factReg.pdf |factReg.html✨
factReg/json (API)
NEWS
| # Install 'factReg' in R: |
| install.packages('factReg', repos = c('https://bartjanvanrossum.r-universe.dev', 'https://cloud.r-project.org')) |
- drops_GE - DROPS data sets
- drops_GnE - DROPS data sets
- drops_K - DROPS data sets
- drops_nGnE - DROPS data sets
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 1 years agofrom:52a50746de. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 19 2024 |
| R-4.5-win | OK | Nov 19 2024 |
| R-4.5-linux | OK | Nov 19 2024 |
| R-4.4-win | OK | Nov 19 2024 |
| R-4.4-mac | OK | Nov 19 2024 |
| R-4.3-win | OK | Nov 19 2024 |
| R-4.3-mac | OK | Nov 19 2024 |
Dependencies:codetoolsforeachglmnetiteratorslatticemathjaxrMatrixRcppRcppEigenrrBLUPshapesurvival
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| DROPS data sets | drops_GE drops_GnE drops_K drops_nGnE |
| Penalized factorial regression using glmnet | GnE |
| Genomic prediction using glmnet, with a genotype-specific penalized regression model. | perGeno |
